BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C04LP1|AL425496
(1046 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig426 1302 0.0
3x_Contig1517 550 e-156
>3x_Contig426
Length = 1800
Score = 1302 bits (656), Expect = 0.0
Identities = 659/660 (99%)
Strand = Plus / Plus
Query: 1 gtcatcagaatacaaagtgtgttcaataacaattcagagtgggaattgctgttcgagtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 gtcatcagaatacaaagtgtgttcaataacaattcagagtgggaattgctgttcgagtac 1188
Query: 61 aagaagtttattttaattgctatatctattaagtgcttctgtttctctttcggggcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 aagaagtttattttaattgctatatctattaagtgcttctgtttctctttcggggcttta 1248
Query: 121 tttgaatgcaaagagttgtttactatactggcaacggcttaaataacgggaatagtcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 tttgaatgcaaagagttgtttactatactggcaacggcttaaataacgggaatagtcagt 1308
Query: 181 gggtaagtcattggttgcatcgtaataagggaacttctaagtacgttggattaggattag 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 gggtaagtaattggttgcatcgtaataagggaacttctaagtacgttggattaggattag 1368
Query: 241 cagtagcgataactgtttatgttttaggacccacggttactagctggatttttggagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1369 cagtagcgataactgtttatgttttaggacccacggttactagctggatttttggagaaa 1428
Query: 301 agatgtttagttccagtagcaagagaagcgataagttcactacggggttaattaacaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1429 agatgtttagttccagtagcaagagaagcgataagttcactacggggttaattaacaatc 1488
Query: 361 gtaatgactgttttgccaactcttccatacaagcgctttcatcacttgtatatttgacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1489 gtaatgactgttttgccaactcttccatacaagcgctttcatcacttgtatatttgacaa 1548
Query: 421 agtacctcaatgatatattaaagcaggctcaattcttaaccacattgatggacattaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1549 agtacctcaatgatatattaaagcaggctcaattcttaaccacattgatggacattaatg 1608
Query: 481 ggaatgggtccagttctggggggcagaaacaatctagtgatgaagatagtgcaaatggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1609 ggaatgggtccagttctggggggcagaaacaatctagtgatgaagatagtgcaaatggtg 1668
Query: 541 ttccattgcaggaagaagttacggaagacttgtcaactgcaaagagacctaacttgtgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1669 ttccattgcaggaagaagttacggaagacttgtcaactgcaaagagacctaacttgtgga 1728
Query: 601 aagcacataccagtactaatacggtttgtactttacggtttcaagatgccatgactccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1729 aagcacataccagtactaatacggtttgtactttacggtttcaagatgccatgactccaa 1788
>3x_Contig1517
Length = 8289
Score = 550 bits (277), Expect = e-156
Identities = 311/321 (96%), Gaps = 2/321 (0%)
Strand = Plus / Plus
Query: 718 aagaagtatcaactgaccagtcagaggaccatagtgagggtgagagtaccgatgaggccg 777
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 aagaagtatcaactgatcagtcagaggaccatagtgagggttttgttaccgatgaggccg 60
Query: 778 atgaagtagagtcatcttcaaaggatatccctaagatccctcttcatgagtccttggctc 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgaagtagagtcatcttcaaaggatatccctaagatccctcttcatgagtccttggctc 120
Query: 838 aaatactgtaccagttgcagcaaacggtaactgcacagcatcatatttctatttggccct 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatactgtaccagttgcagcaaacggtaactgcacagcatcatatttctatttggccct 180
Query: 898 ttttaagagtkatagagggtatttttaaggccaagatttctaccggccaaaatgacgctc 957
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttaagagtgatagagggtatttttaaggccaagatttctaccggccaaaatgacgctc 240
Query: 958 atgaattgacacaagttgttttgcagacgttggagaacgaaaacttggctctac-aaaat 1016
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 241 atgaattgacacaagttgttttgcagacgttggagaacgaaaacttggctctacaaaaat 300
Query: 1017 ttgtcaag-awcactcgttga 1036
|||||||| | ||||||||||
Sbjct: 301 ttgtcaagaatcactcgttga 321
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6840
Number of Sequences: 1807
Number of extensions: 6840
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 2
length of query: 1046
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1030
effective length of database: 10,329,639
effective search space: 10639528170
effective search space used: 10639528170
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)